2011-01-14

lysis was performed at the SCIBLU Genomics Resource Center [15] using the Illumina (Illumina, San Diego, CA, USA) Omni 1 M and 2.5 M Quad beadchips (n =5 and 21, respectively) according to manufacturer’s instructions. The 26 cases are referred to as the Lund-HER2-SNP set and are part of a previous study of

12 Department of Clinical Sciences, Division of Oncology and Pathology, Lund University, Medicon Village 404-A2, SE-22381 Lund, Sweden ; Lund University Cancer Center, SE-22381 Lund, Sweden ; CREATE Health Strategic Centre for Translational Cancer Research, Lund University, SE-22381 Lund, Sweden ; Department of Clinical Sciences, SCIBLU Genomics, Lund University, SE-22381 Lund, Sweden. Total RNA from fresh-frozen resection samples of 308 urothelial carcinomas was hybridized to the Illumina HumanHT-12 V3.0 expression beadchip arrays (Illumina Inc) at the SCIBLU Genomics Centre at Lund University Sweden. Equipment and resources GeoMx Digital Spatial Profiler for hi-plex spatial expression analysis Nanostring nCounter flex instrument for expression analysis of genes and proteins Agilent Bioanalyzer for measuring RNA, DNA, and protein quality and integrity Nanodrop 8000 for measuring RNA/DNA concentration and purity Tiling 32k BAC microarrays, with contiguous genome wide coverage, were produced at the Microarray DNA Resource Centre, SCIBLU Genomics, Department of Oncology, Lund University, Sweden (http://www.lth.se/sciblu). 2020-03-12 · Overall design. Total RNA from fresh-frozen resection samples of 308 urothelial carcinomas was hybridized to the Illumina HumanHT-12 V3.0 expression beadchip arrays (Illumina Inc) at the SCIBLU Genomics Centre at Lund University Sweden ( http://www.lth.se/sciblu ). Supplementary files: 2020-12-09 · Affymetrix whole-transcriptome expression profiling was processed by Swegene centre for integrative biology (SCIBLU) genomics, Affymetrix unit at Lund University, Sweden. MCAs from 6 stroke females and 6 female controls were analyzed.

Sciblu genomics

Jun 30, 2009 Lund University, Lund, Sweden; Department of Oncology, SCIBLU Genomics– DNA Microarray Resource Center, University of Lund, Lund, Jun 18, 2010 Genomic DNA was isolated from fresh frozen primary breast tumours in a produced at the SCIBLU Genomics Centre at Lund University, The Functional Genomics Core facility provides infrastructure for unbiased Target Discovery by means of genome-wide genetic screening in cultured cells. +905333717401. SCIBLU Genomics. Sweden. Ingrid M. Rading ingrid. magnusson_rading@immun.lth.se 0707185165. Microsynth Austria.

BioMed Central Page 1 of 12 (page number not for citation purposes) BMC Cancer Research article Open Access Potential predictive markers of chemotherapy resistance in stage expression system at SCIBLU Genomics (BMC, Lund University, Lund, Sweden).

NCBI's Gene Expression Omnibus (GEO) is a public archive and resource for gene expression data.

Search for more papers by this author 2018-09-26 Tiling 32k BAC microarrays, with contiguous genome wide coverage, were produced at the Microarray DNA Resource Centre, SCIBLU Genomics, Department of Oncology, Lund University, Sweden … 2020-11-11 2Division of Oncology and Pathology, Department of Clinical Sciences, Lund University, Lund, Sweden Lund University Cancer Center, Lund, Sweden SCIBLU Genomics, Department of Clinical Sciences, Lund University, Lund, Sweden. 3Department of Pathology, Skåne University Hospital, Lund, Sweden. 2011-10-16 2020-03-12 2010-11-27 2011-12-14 2015-04-03 2017-12-26 Lund, Sweden and 5Department of Clinical Genetics/SCIBLU Genomics, DNA Microarray Resource Centre Lund University, Lund, Sweden Email: Karin Broberg* - karin.br oberg@med.lu.se; Elizabeth Huynh - liseo_82@hotmail.com; Karin Schläwicke Engström - karin.engstrom@med.lu.se; Jonas Björk - jonas.bjork@skane.se; Maria Albin - maria.albin@med.lu.se; 2010-06-18 SCIBLU Genomics, Department of Clinical Sciences, Lund University, Lund, Sweden.

2020-03-12

1. Project number (filled in by the microarray centre): 2. Contact name: 3. Department: 4.

Lund, Sverige Info.
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Section V consist of: Clinical Physiology, History of Medicine, Diagnostic Radiology, Biomedical Engineering, Medical Radiation Physics, Surgery, Pediatrics, Obstetrics and Gynecology, Mass Spectrometry and Pato-logic SCIBLU Genomics, Department of Oncology & Immuntechnolgy, Lund University jul 2008 – dec 2015 7 år 6 avd f Onkologi/SCIBLU genomics LU BMC C13 221 84 Lund. The mutational landscape of urothelial cancer (bladdaer cancer) 210 000 kr.

SpatialOmics@LU erbjuder multiplex, spatial expressionsanalys av både RNA och protein i vävnadssnitt med Nanostrings GeoMx DSP .
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Screening for gene copy‐number alterations (CNAs) has improved by applying genome‐wide microarrays, where SNP arrays also allow analysis of loss of heterozygozity (LOH). We here analyzed 10 chronic l

There is no requirement to use BASE after receiving data. Backup of data Affymetrix whole-transcriptome expression profiling was processed by Swegene centre for integrative biology (SCIBLU) genomics, Affymetrix unit at Lund University, Sweden. MCAs from 6 stroke females and 6 female controls were analyzed. The integrity of the RNA was measured with the Agilent Bioanalyzer (Agilent Technologies, CA, USA).

duced at the SCIBLU Genomics Centre at Lund Univer-sity, Sweden [18] as described by Jönsson et al. [19] and processed as described [20]. Briefly, expression levels have been centred across all 577 samples to obtain expression levels relative to a large set of breast tumours. Also, samples have been classified into molecular sub-

We here analyzed 10 chronic l We thank SCIBLU genomics and Marcus Ljungqvist for assistance. Funding statement This study was financially supported by the Swedish Research Council (B.H. … SCIBLU Genomics Centre, Lund University, Sweden. The cDNA synthesis, labeling, and subsequent hybridization to the Hu-manHT-12 v4 Expression BeadChips (Illumina Inc., San Diego, CA) was performed according to the manufacturer’s instructions. The Illumina HumanHT-12 v4 Expression BeadChips allow genome-wide expression profiling of more than DNA copy number aberrations (DCNA) and subsequent altered gene expression profiles may have a major impact on tumor initiation, on development, and eventually on recurrence and cancer-specific mortality.

Supplementary Sep 24, 2012 Foundation||SCIBLU Genomics center||governmental funding of clinical research within the national health services (ALF)||Lund University||. May 4, 2017 Philippine Genome Center DNA Sequencing Core Facility SCIBLU – Swegene Centre for Integrative Biology at Lund University Lund Univ.